Browsing by Author "Sachsenberg, Timo"

Now showing items 1-20 of 41

A Comprehensive Evaluation of Consensus Spectrum Generation Methods in Proteomics

Sachsenberg, Timo (2022)
A computational platform for high-throughput analysis of RNA sequences and modifications by mass spectrometry

Wein, Samuel; Sachsenberg, Timo; Kohlbacher, Oliver (2020)
A proteomics sample metadata representation for multiomics integration and big data analysis

Kohlbacher, Oliver; Sachsenberg, Timo (2021)
A Statistical Comparison of SimTandem with State-of-the-Art Peptide Identification Tools

Kohlbacher, Oliver; Sachsenberg, Timo (2013)
Analysis of protein-DNA interactions in chromatin by UV induced cross-linking and mass spectrometry

Sachsenberg, Timo; Kohlbacher, Oliver (2020)
Analysis of protein-RNA interactions in CRISPR proteins and effector complexes by UV-induced cross-linking and mass spectrometry

Sachsenberg, Timo; Kohlbacher, Oliver (2015)
BioContainers: an open-source and community-driven framework for software standardization

Sachsenberg, Timo; Pfeuffer, Julianus (2017)
Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients

Sachsenberg, Timo; Kohlbacher, Oliver (2018-08-13)
Computational methods for mass spectrometry-based study of protein-RNA or protein-DNA complexes and quantitative metaproteomics

Sachsenberg, Timo (2017)
Computational Methods for Mass Spectrometry-based Study of Protein-RNA or Protein-DNA Complexes and Quantitative Metaproteomics

Sachsenberg, Timo (2018)

In the last decade, the use of high-throughput methods has become increasingly popular in various fields of life sciences. Today, a wide range of technologies exist that allow gathering detailed quantitative insights into ...
Corrigendum to Tracing incorporation of heavy water into proteins for species-specific metabolic activity in complex communities

Sachsenberg, Timo; Kohlbacher, Oliver (2020-07-30)
DIAproteomics: A Multifunctional Data Analysis Pipeline for Data-Independent Acquisition Proteomics and Peptidomics

Bichmann, Leon; Kuchenbecker, Leon; Sachsenberg, Timo; Alka, Oliver; Pfeuffer, Julianus; Kohlbacher, Oliver (2021)
Differential Enzymatic 16O/18O Labeling for the Detection of Cross-Linked Nucleic Acid-Protein Heteroconjugates

Sachsenberg, Timo; Kohlbacher, Oliver (2017)
Dithiothreitol (DTT) Acts as a Specific, UV-inducible Cross-linker in Elucidation of Protein-RNA Interactions

Sachsenberg, Timo; Kohlbacher, Oliver (2015)
EPIFANY: A Method for Efficient High-Confidence Protein Inference

Pfeuffer, Julianus; Sachsenberg, Timo; Dijkstra, Tjeerd; Kohlbacher, Oliver (2020)
Expanding the Use of Spectral Libraries in Proteomics

Sachsenberg, Timo (2018)
Generation of ENSEMBL-based proteogenomics databases boosts the identification of non-canonical peptides

Sachsenberg, Timo (2022)
In-depth analysis of protein inference algorithms using multiple search engines and well-defined metrics

Audain, Enrique; Sachsenberg, Timo; Kohlbacher, Oliver (2017)
Intensity and retention time prediction improves the rescoring of protein-nucleic acid cross-links

Siraj, Arslan; Kohlbacher, Oliver; Sachsenberg, Timo (2024-04-17)
LFQProfiler and RNPx1 : Open-Source Tools for Label-free Quantification and Protein-RNA Cross-Linking Integrated into Proteome Discoverer

Veit, Johannes; Sachsenberg, Timo; Chernev, Aleksandar; Aicheler, Fabian; Kohlbacher, Oliver (2016)

Now showing items 1-20 of 41

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Browsing by Author "Sachsenberg, Timo"

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