Protein Crystallization Induced by Multivalent Metal Salts

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URI: http://hdl.handle.net/10900/64628
http://nbn-resolving.de/urn:nbn:de:bsz:21-dspace-646288
http://dx.doi.org/10.15496/publikation-6050
Dokumentart: PhDThesis
Date: 2015-09
Language: English
Faculty: 7 Mathematisch-Naturwissenschaftliche Fakultät
Department: Physik
Advisor: Schreiber, Frank (Prof. Dr.)
Day of Oral Examination: 2015-07-20
DDC Classifikation: 530 - Physics
Keywords: Physik , Kristallisation , Biophysik , Weiche Materie , Kondensierte Materie , Proteine , Streuung , Kleinwinkelstreuung
Other Keywords:
proteins
crystallization
soft matter
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Abstract:

Proteins and their interactions with each other are of interest for fundamental research as well as numerous applications in biology, biochemistry or medical and pharmaceutic industry. In recent years, research in our group has shown that trivalent metal salts can cause a rich phase behavior in aqueous protein solutions, including reentrant condensation, metastable liquid–liquid phase separation and crystallization. The topic of this thesis is on the one hand the influence of control parameters in these systems on protein aggregation and especially crystallization. On the other hand, we focus on the discrimination between classical and non- classical pathways of crystal nucleation and growth. We study mainly the model protein β-lactoglobulin (BLG) in the presence of the divalent salts zinc chloride and cadmium chloride and the trivalent yttrium chloride. It has been observed that trivalent salts can cause a reentrant condensation in protein solutions: below a certain salt concentration c* and above a second one, c**, samples are clear, indicating stable solutions. At intermediate salt concentra- tions, samples become turbid due to aggregation. The divalent salts CdCl2 and ZnCl2 cause a first boundary in BLG solutions and a partial re-clearing at a salt concentration we denote as pseudo-c**. Using SAXS, we show that the effective interactions become less repulsive approaching c* and finally attractive. Although the attractive interaction becomes weaker when pseudo-c** is crossed, repulsion is not reached again. The weak attraction close to the boundaries provides optimal conditions for crystallization. Depending on salt concentration and temperature, different pathways are found. We discuss possible scenarios based on the phase behavior of colloidal systems with short-range attractions. Structure determina- tion by X-ray diffraction shows that the cations are an integral part of the lattice and mediate new contacts by the formation of ion bridges. While it was not possible to distinguish if the observed intermediate phases are a direct precursor for crystals or merely act as an agent for heterogeneous, classical nucleation in the system with ZnCl2 , real-time SAXS measurements of BLG in the presence of CdCl2 provide evidence for a multistep process around pseudo-c**: in the SAXS data, a broad peak forms first, indicating an intermedi- ate structure, followed by Bragg peaks. To quantify the relationship between the crystals and their possible precursor, the area under the Bragg peaks and under the additional broad peak were evaluated and plotted as a function of time. It can be observed that the maximum amount of the intermediate coincides with the steepest increase of the crystalline state. We propose a first step in which a non- crystalline, ordered structure is formed within metastable aggregates, followed by crystal nucleation in this precursor phase. Our observations further suggest that the number of crystals increases strongly in the beginning, but their growth speed is low inside the aggregates that have a high viscosity which hinders the diffusion of protein molecules. After enough aggregate material has been consumed by crystal nucleation and growth, the crystals are in contact with the dilute solution and grow faster. The number of crystals, however, stays almost constant in this stage. Based on these assumptions, a rate equation model was applied which reproduces the experimentally observed kinetics well. Increasing the salt concentration in the vicinity of pseudo-c** leads to a reduction of aggregates and to fewer crystals that grow larger due the larger amount of available proteins per crystal. The nonclassical crystallization pathway described above suggests that the struc- ture of the intermediate phase may be crucial for the subsequent crystal nucleation. We thus performed a study on the structure of potential precursor phases in the system of BLG in the presence of YCl3 on different length scales by a combination of SAXS, SANS and VSANS. The monomer–monomer correlation within larger compounds, the scattering of dimers as well as the correlation between clusters and their spacial arrangement can be identified. When the system is cooled below a certain transition temperature, changes in the internal structure of the inter- mediate phase can be observed. Moreover, time-dependent SAXS measurements show clear isosbestic points, allowing to describe the kinetics of the structural evolution of the intermediate phase by a two-state model. Experiments on other protein–salt systems suggest that our work can be, to some extent, generalized. For some of the systems, structure determination by X-ray diffraction has been performed successfully. In all cases, crystal contacts are mediated by ion bridging. Tuning the protein–protein interactions by the addition of multivalent metal salts provides a method for the growth of potentially high-quality crystals.

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